Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905808.1_cds_XP_016456079.1_49950
CDS Infomation

[gene=LOC107780073] [db_xref=GeneID:107780073] [protein=riboflavin biosynthesis protein PYRR, chloroplastic] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016456079.1] [location=join(59101..59493,60552..60686,65367..65466,65567..65692,65845..66158,66890..67011,67687..67691,67851..68089,68174..>68299)] [gbkey=CDS]
Sequence

ATGGCTCATTTACTAGGAGGATTAGCTACTCCCTTTCTCTGCAAACCCATTAATGCTTCT
TCTTCTTTCAACAACAATTACACTTCCGCTTCCGCTTCCGCTTCCTCTCTCCACGCGCTT
GATTCTCTGTACATCAAACGTGCTGCCGAGCTAGCTGACAAATCGGCGGGATTCACCGCT
CCTCATCCTAACTTCGGCTGCGTAATCGCCCATCCCAATAATGGTGGAGGTACGGTGGTC
GGAGAAGGTTACTTATACGCCGAAGGGACAATTCCGGCGGAGGTGCAGGCTGTTGAAGCC
GCCGTCGAGCGGTGTCGAGGTGCCACTGCTTATCTCAATATGGAACCTGGAGACTGTCAC
AGCAATAGCAGTGCAGTCTCTGCCCTGATCAAGGCAGGAATTAGTAGAGTTGTTATTGGA
ATACGGAATCCGTTGCAACACCTTCGTGGCAATGCCATTCACGCGTTGAGAAGTGAAGGC
CTTCAAGTTGATGTGCTTGGGGAAGATACACAGAATAAGATTATTGAGGACGCTGTGAAA
TCCTGCCTTTTTGTCAATGCTCCTTTGCTCTATAGAGCTGCGTGTCAAGTACCGTTCTCT
GTTCTCAAGTATGCAATGACACTTGATGGGAAAATTTCTGCTAGTAGTGGTCATGCATCA
TGGATCAGTAGCAAAAAGTCAAGAACTCGTGTTTTTGAAATGAGGGGTAGAAGTGATGCT
GTTATTGTTGGAGGAAATACTGTGCGCAGAGACAATCCACGTTTGACGGTTAGACATGGT
GGCAGCCATCTTCCCCGACGTATTGTATTATCTCAAACTCTTGATCTTCCAGAAGAAGCA
CATATTTGGAATGTTTCTGAGGTCCCCACTATAGTTGCTACACAAAGAGGTGCAAGGAGG
AGTTTTCAAAAATTGCTTGCATCCAAAGGCGTTGAAGTGGTTGAATTTGATATTTTAGAT
CCTAGAGATGTTATGGGGTATTTATATGATCGTGGTTACCTCTCAATTCTGTGGGAGTGT
GGAGGGACACTGGCTGCATCTGCTATTTCTTCTGGGGTCATACACAAGGTACATGCATTT
GTTGCTCCCAAAATTATAGGTGGGAAGAATGCACCGTCTCCAGTCGGTGAACTTGGAATG
GTAGAGATGACCCAGGCTCTGGAACTAATTGATGTTTGCTATGAGCAGGTTGGACCCGAC
ATACTTGTTAGTGGGTTTCTTCAGCCAGTTCCTGATCTGACACCTACTATTCCATCGGTA
GAAGAAACTTCGGCCATTGATCCTACCATTTCTCCTTATGAATCAAGCATCATATTCTTT
TACAAGACATGGGATCCATATGGTGGCTTCTCAAACTTCTCTCTCCATCCATTTCAAATG
CCTAATGAAAATGGAGAACTTGTCACCTGGTCCAGTGTAGAGCATTATTACCAGGCACAA
AAGTTTGTTGGGGCATCTGATCCTGTAGCTAAGAGCTGCATGGAAGAAATACAATGTGCA
AAGAGCCCTGAGGAAGCAGCACGAATAGGAAGGAGAATACAGAGGCAGCAACCTAATCTG

Peptide Sequence

PEP ID

XP_016456079.1
PEP Infomation

PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic [Nicotiana tabacum]
Sequence

MAHLLGGLATPFLCKPINASSSFNNNYTSASASASSLHALDSLYIKRAAELADKSAGFTA
PHPNFGCVIAHPNNGGGTVVGEGYLYAEGTIPAEVQAVEAAVERCRGATAYLNMEPGDCH
SNSSAVSALIKAGISRVVIGIRNPLQHLRGNAIHALRSEGLQVDVLGEDTQNKIIEDAVK
SCLFVNAPLLYRAACQVPFSVLKYAMTLDGKISASSGHASWISSKKSRTRVFEMRGRSDA
VIVGGNTVRRDNPRLTVRHGGSHLPRRIVLSQTLDLPEEAHIWNVSEVPTIVATQRGARR
SFQKLLASKGVEVVEFDILDPRDVMGYLYDRGYLSILWECGGTLAASAISSGVIHKVHAF
VAPKIIGGKNAPSPVGELGMVEMTQALELIDVCYEQVGPDILVSGFLQPVPDLTPTIPSV
EETSAIDPTISPYESSIIFFYKTWDPYGGFSNFSLHPFQMPNENGELVTWSSVEHYYQAQ
KFVGASDPVAKSCMEEIQCAKSPEEAARIGRRIQRQQPNLVRPDWESVKIDAMYKALKCK
FATYPYLNSLLLSTAGSVLVEGSPHDLFWGGGRDGEGLNYLGRLLMKLRSEFLGDSSTSQ
NSLLHQTSENQ

Transcript Sequence

Gene sequence data has not been registered.